rs329254 chr7:35025645 T>C
- Sequence
aagaattcccaccacttatactga[T/C]gatatagaatatgaatgataataa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) breast tumor
- ASB for transcription factors
- ESR1_HUMAN PRGR_HUMAN ARI1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.32 | 1.20 | 2.34 | n/a | No Hit | |||
| PRGR_HUMAN | -0.66 | 1.80 | 2.00 | n/a | No Hit | |||
| ARI1A_HUMAN | 0.13 | 1.93 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood