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rs331513 chr11:4493455 G>A

Sequence
gccctctagtggccctgtccgggc[G/A]tgacagaggctcacacttgtcttc
ASB in cell types
THP-1 (acute monocytic leukemia) spleen esophagus squamous epithelium GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
RAD21_HUMAN STAG1_HUMAN KDM6A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.86 0.29 1.2·10-251.00 1.08 n/a n/a
STAG1_HUMAN 0.12 0.83 1.003.5·10-5 1.10 n/a n/a
KDM6A_HUMAN 2.84 n/a 8.0·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Lung Nerve_Tibial Spleen Thyroid Whole_Blood

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