rs331570 chr5:95152684 G>T
- Sequence
aggtgaaggaaaaataacttttgg[G/T]ttcactctttatttacattcttat
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.12 | 1.82 | 2.64 | n/a | No Hit | |||
| ANDR_HUMAN | 0.02 | 2.62 | 1.62 | 3.32 | Concordant |
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Motif analysis
