rs331574 chr5:95162450 A>G
- Sequence
tgttaaatggaagaaaagtcatgt[A/G]acttcctcttttagattatttaca
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- RAD51_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | n/a | 2.76 | 1.00 | n/a | n/a | |||
| ERG_HUMAN | -0.55 | 2.42 | 2.00 | 0.77 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, infant head circumference, total cholesterol