rs33184 chr12:30851417 C>T
- Sequence
gtggaaggcctgacatcagtcagg[C/T]ccgcccgcagccatccggagacct
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) epithelial cell of prostate GM02610 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.35 | 2.33 | 1.25 | n/a | No Hit | |||
| STAG1_HUMAN | -0.35 | 2.38 | 1.46 | n/a | n/a | |||
| FOXK2_HUMAN | 2.69 | -2.43 | 1.00 | n/a | n/a |
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