rs331949 chr4:142742053 T>C

Sequence
agtaaaacagtagaataccaacga[T/C]aaagagatcttcttacagcctgaa
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.20 1.48 1.005.2·10-3 1.39 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

EMBL-EBI adventurousness
GRASP body mass index (bmi) college completion major depressive disorder (broad definition) major depressive disorder (broad definition) (females)
GTEx eQTL Whole_Blood

Download