ADASTRA v5.1.3
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rs332849
chr19:38153311
G
>
A
Sequence
caggagcaggactggctgcgtccc[G/A]tggcttttcattacataaaccctc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN
1.87
-0.49
0.01
1.00
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
body mass index (bmi)
,
microalbuminuria
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Amygdala
,
Brain_Cerebellum
,
Colon_Sigmoid
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)