rs333340 chr3:124607378 T>C
- Sequence
gcattgaaaatgagccaagatata[T/C]actgaatcactgtggttacttcta
- ASB in cell types
- HepG2 (hepatoblastoma) CFPAC-1(pancreatic ductal adenocarcinoma) LNCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN NFIA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -1.17 | 2.75 | 1.37 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.07 | 1.72 | 1.33 | n/a | No Hit | |||
| NFIA_HUMAN | -2.25 | 2.63 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3