rs333614 chr8:55884176 G>T
- Sequence
tgcagtggtgcaatctcagctcac[G/T]gcaatctccgcctcctgggttcaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) U937 (adult acute monocytic leukemia) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- CEBPA_HUMAN CEBPB_HUMAN KDM1A_HUMAN CDK8_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | 3.23 | n/a | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | n/a | 1.84 | 3.50 | n/a | No Hit | |||
| KDM1A_HUMAN | -0.45 | 2.08 | 2.00 | n/a | n/a | |||
| CDK8_HUMAN | 2.11 | -0.18 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid