rs33385 chr5:143230077 G>A
- Sequence
tttaacagccactcagagcagagc[G/A]caaactgtcacgtcctgtggtttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.18 | -5.26 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, rheumatoid arthritis, systolic blood pressure (sbp), triglycerides, urinary albumin-to-creatinine ratio