rs334124 chr2:178193688 A>G

Sequence
aatgtctgtacaaatatttacatt[A/G]ccccgtccctcccagcaaatttgc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.65 n/a 1.2·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  birth weight,  fasting insulin,  hdl cholesterol change with statins,  homa-b
GTEx eQTL Colon_Transverse,  Liver,  Nerve_Tibial,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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