rs335426 chr5:177481730 A>C

Sequence
gtgctgggattagaggtgtgagtc[A/C]ccgtgcccagcccttctcgtctct
ASB for transcription factors
PRDM9_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM9_HUMAN 2.38 -2.07 0.051.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI cognitive performance,  cognitive performance (mtag)
GTEx eQTL Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Mucosa,  Liver,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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