rs335466 chr5:177462529 C>A
- Sequence
tcctgtttccggaggcacctcccc[C/A]ctccgctgtgagcaacgcaggatg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ERG_HUMAN ARI1B_HUMAN ZBT40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | 2.27 | -4.05 | 1.50 | n/a | No Hit | |||
| ARI1B_HUMAN | 2.79 | -5.12 | 2.00 | n/a | n/a | |||
| ZBT40_HUMAN | 2.61 | -4.84 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP activated partial thromboplastin time, advanced age-related macular degeneration, college completion, factor xii antigen, ldl cholesterol, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Whole_Blood