rs336484 chr5:34839006 G>T

Sequence
agttttggggcgagccggaggccg[G/T]gcgcgtctaacctgcggggaaggg
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney)
ASB for transcription factors
TYY1_HUMAN ZBT40_HUMAN GABP1_HUMAN HDAC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 2.17 -0.40 1.2·10-41.00 1.50 n/a No Hit
ZBT40_HUMAN 1.15 2.73 1.001.6·10-4 1.00 n/a n/a
GABP1_HUMAN -1.38 1.10 1.007.0·10-4 1.17 n/a n/a
HDAC1_HUMAN -1.00 2.16 1.001.1·10-3 1.00 n/a n/a
RFX1_HUMAN 0.34 0.59 0.582.1·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

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