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rs336559 chr3:161416178 T>C

Sequence
gaatgctgaagttgtcctggcaac[T/C]aagggagtaaaagctggtaaagaa
ASB in cell types
22RV1 (prostate carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
ANDR_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.23 -0.32 8.9·10-30.98 1.50 n/a No Hit
TF65_HUMAN 2.34 n/a 0.021.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Colon_Transverse Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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