ADASTRA v5.1.3
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rs336559
chr3:161416178
T
>
C
Sequence
gaatgctgaagttgtcctggcaac[T/C]aagggagtaaaagctggtaaagaa
ASB in cell types
22RV1 (prostate carcinoma)
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
ANDR_HUMAN
TF65_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
3.23
-0.32
8.9·10
-3
0.98
1.50
n/a
No Hit
TF65_HUMAN
2.34
n/a
0.02
1.00
2.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
GTEx eQTL
Colon_Transverse
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)