ADASTRA v5.1.3
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Bill Cipher
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rs33684
chr5:16508789
T
>
C
Sequence
gtgctcctcccttactcagaaagt[T/C]ggtgtttacaaacttccaaagcgc
ASB in cell types
breast tumor
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
breast tumor
n/a
2.82
1.00
0.02
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
birth weight
,
eye color
,
resistance to kuru in aged women despite likely exposure
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Colon_Transverse
,
Lung
,
Muscle_Skeletal
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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