ADASTRA v5.1.3
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Bill Cipher
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adastra.autosome.org
rs337851
chr5:78908567
G
>
T
Sequence
ggcaggctctgtgcgggcagcctg[G/T]ccggaacaccaacaatgaaaacaa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN
1.18
0.40
0.02
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Hypothalamus
,
Cells_Cultured_fibroblasts
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)