rs339432 chr5:13977095 C>T
- Sequence
ttgctaaggagggacgcagaggtg[C/T]tctggaaatgtttcattacagtgt
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | 0.88 | 0.38 | 2.00 | |||
| MCF7 (Invasive ductal breast carcinoma) | 0.01 | 1.16 | 2.74 | |||
| LNCaP (prostate carcinoma) | 0.04 | 1.75 | 1.25 |
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