ADASTRA v5.1.3
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rs340047
chr5:145825897
C
>
T
Sequence
gatctgacgccatcttgtggtaac[C/T]tgaatattcatgttttaattcatg
ASB in cell types
neural cell
Peyer's patch
adult erythroblasts
IMR90 (lung fibroblasts)
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(+3 others)
ASB for transcription factors
KDM6A_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM6A_HUMAN
n/a
1.95
1.00
7.4·10
-3
3.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
homa-b
,
ldl cholesterol change with statins
,
sporadic creutzfeldt-jakob disease
,
total cholesterol change with statins
GTEx eQTL
Artery_Tibial
,
Esophagus_Muscularis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)