ADASTRA v5.1.3
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rs340876
chr1:213984789
C
>
T
Sequence
ggctgacctggaagtccttaggca[C/T]ccttttccaaaatccacgtccact
ASB in cell types
HEK293 (embryonic kidney)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.72
0.15
6.4·10
-3
1.00
2.01
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
Finemapping
fasting glucose related traits
GTEx eQTL
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Hippocampus
,
Brain_Hypothalamus
,
Brain_Putamen_basal_ganglia
,
Colon_Transverse
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Liver
,
Pancreas
,
Pituitary
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
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