rs34106818 chr17:51439698 C>G

Sequence
ctccgtttcctgttggttctgttt[C/G]cttcctattaaattactgaactgt
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) LNCaP C4-2B (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HUVEC-C (HUVEC, umbilical vein endothelial cells) 2.13 -1.40 0.041.00 2.00
LNCaP C4-2B (prostate carcinoma) -1.53 1.81 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Skin_Sun_Exposed_Lower_leg

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