rs34121469 chr1:217631293 T>C

Sequence
gagaaaagaggagtgaacaaaaag[T/C]cgaaccccgggagtgagctatggt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte
ASB for transcription factors
RFX1_HUMAN CTCF_HUMAN BMI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN 0.54 n/a 2.0·10-61.00 2.25 n/a No Hit
CTCF_HUMAN 1.06 0.40 0.021.00 1.33 n/a No Hit
BMI1_HUMAN 0.62 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

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