rs34185854 chr1:226425718 C>T
- Sequence
gatggccggatgtgttaggagttt[C/T]ttctttctggtgggttcgtggttt
- ASB in cell types
- SEM (childhood B acute lymphoblastic leukemia) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN RUNX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.54 | -0.83 | 1.00 | n/a | No Hit | |||
| RUNX2_HUMAN | 2.32 | -3.69 | 1.33 | n/a | No Hit |
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