rs342056 chr2:20452746 A>G
- Sequence
tcctctgtgccttccagggatgtg[A/G]ttcagacacaggactagctttgtg
- ASB in cell types
- epithelial cell of prostate MCF7L-P(immortalized breast epithelial cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.06 | 1.48 | n/a | No Hit | |||
| TF65_HUMAN | -1.11 | 1.57 | 3.00 | n/a | No Hit |
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