ADASTRA v5.1.3
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rs342292
chr7:106730198
C
>
G
Sequence
aggtggtacagttccaggtgatga[C/G]aggttccaaggtgtgtcatgaaag
ASB in cell types
MDM(monocyte derived macrophages)
monocyte-derived macrophages from peripheral blood
Detroit 562 (Pharyngeal squamous cell carcinoma)
ASB for transcription factors
SPI1_HUMAN
TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
3.13
0.19
1.6·10
-6
0.99
1.62
n/a
No Hit
TF65_HUMAN
1.43
-0.69
0.01
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
platelet count
GRASP
ldl cholesterol
,
platelet count
,
total cholesterol
,
triglycerides
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)