rs342550 chr5:16179016 C>T
- Sequence
cgagctggagccgccaccggctgc[C/T]tcggggtctcgccgggccttacct
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMCE1_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCE1_HUMAN | 3.32 | n/a | 2.00 | n/a | n/a | |||
| TEAD4_HUMAN | 3.30 | n/a | 2.00 | n/a | No Hit |
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