rs342817 chr1:229231439 G>A

Sequence
agggattctgtctttgaaacaagg[G/A]ggccagagatgtactgtgatccat
ASB in cell types
HEK293 (embryonic kidney) Detroit 562 (Pharyngeal squamous cell carcinoma)
ASB for transcription factors
TF65_HUMAN P63_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -0.61 1.26 1.006.5·10-3 2.00 n/a No Hit
P63_HUMAN 0.14 0.92 0.930.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height paternal transmission distortion salmonella-induced pyroptosis
GTEx eQTL Prostate Skin_Sun_Exposed_Lower_leg Stomach Thyroid

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