rs343423 chr3:5188763 C>G
- Sequence
tacctcgcacccccacctctatca[C/G]attgccacacccacgtcttttcta
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts 22RV1 (prostate carcinoma)
- ASB for transcription factors
- GATA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | n/a | 3.27 | 2.00 | 0.20 | Weak Concordant | |||
| ANDR_HUMAN | -1.62 | 2.72 | 2.00 | n/a | No Hit |
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Motif analysis
