ADASTRA v5.1.3
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rs343818
chr1:110799077
C
>
T
Sequence
taaaagttaaagaggcagggcagg[C/T]gcacttccagaagctcagcacaat
ASB in cell types
LNCaP (prostate carcinoma)
VCaP (prostate carcinoma)
LN95(Prostate adenocarcinoma)
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma)
1.19
-0.14
5.3·10
-13
1.00
1.47
VCaP (prostate carcinoma)
0.03
1.44
1.00
4.1·10
-6
2.00
LN95(Prostate adenocarcinoma)
1.33
-2.92
0.05
1.00
1.50
22RV1 (prostate carcinoma)
1.22
-3.05
0.05
1.00
2.00
Items per page:
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale