rs343818 chr1:110799077 C>T
- Sequence
taaaagttaaagaggcagggcagg[C/T]gcacttccagaagctcagcacaat
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) LN95(Prostate adenocarcinoma) 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| LNCaP (prostate carcinoma) | 1.19 | -0.14 | 1.47 | |||
| VCaP (prostate carcinoma) | 0.03 | 1.44 | 2.00 | |||
| LN95(Prostate adenocarcinoma) | 1.33 | -2.92 | 1.50 | |||
| 22RV1 (prostate carcinoma) | 1.22 | -3.05 | 2.00 |
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