rs34397648 chr19:610273 G>A
- Sequence
ctccccacagtacaagcaggtgga[G/A]cagtacatgtccttccacaagctg
- ASB in cell types
- LHSAR (prostate epithelial cells) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.98 | -1.38 | 1.00 | -0.33 | Weak Concordant |
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Motif analysis
