ADASTRA v5.1.3
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rs344124
chr4:76704726
C
>
T
Sequence
catagggaagctacaggatttcat[C/T]agggaatgacatcatccatttaca
ASB in cell types
K562 (myelogenous leukemia)
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ATF2_HUMAN
CEBPB_HUMAN
ATF3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN
1.69
n/a
7.2·10
-4
1.00
2.00
n/a
No Hit
CEBPB_HUMAN
1.75
0.10
0.01
1.00
1.00
n/a
No Hit
ATF3_HUMAN
2.26
n/a
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
refractive error
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)