ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs344589
chr19:6590778
A
>
G
Sequence
ctctggcctctttgtacccatctc[A/G]ttctgtcttttcggtcacgcgcct
ASB in cell types
monocytes from periferal blood
GM23248
ASB for transcription factors
SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN
2.34
n/a
1.0·10
-2
1.00
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
eye color
,
ldl cholesterol
,
non-hodgkin lymphoma (diffuse large b-cell lymphoma)
,
partial epilepsy
,
premature ovarian failure
,
spine bone mineral density (bmd)
,
sporadic creutzfeldt-jakob disease
GTEx eQTL
Cells_Cultured_fibroblasts
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)