rs344773 chr19:43675608 G>A
- Sequence
agggatgtcggctccttcctcctc[G/A]tgactcacctgggcctcacccagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes HUVEC-C (HUVEC, umbilical vein endothelial cells) HEK293 (embryonic kidney)
- ASB for transcription factors
- STAT1_HUMAN IKZF1_HUMAN TF65_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -4.88 | 2.47 | 1.67 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.77 | -1.51 | 1.17 | n/a | No Hit | |||
| TF65_HUMAN | -5.69 | 2.05 | 2.50 | n/a | No Hit | |||
| ESR1_HUMAN | -1.62 | 2.55 | 2.00 | n/a | No Hit |
Items per page:
1 – 4 of 4