rs34519250 chr5:125133729 G>C

Sequence
ccagcactttgggaggctgaggca[G/C]gtggatcacctgaggtcaggagtc
ASB in cell types
keratinocytes
ASB for transcription factors
SNAI2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 2.38 n/a 0.011.00 1.00 -5.00 Concordant
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Motif analysis

SNAI2_HUMAN Concordant
SNAI2_HUMAN pic

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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