rs345403 chr7:35721582 G>C

Sequence
tacatctccaaatctggagggcca[G/C]gatatctgtcacacaggcaggcca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) HeLa S3 (cervical adenocarcinoma)
ASB for transcription factors
P53_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P53_HUMAN 2.82 n/a 0.051.00 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins,  total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Testis,  Thyroid,  Whole_Blood

Download