rs345848 chr15:33022629 G>A

Sequence
agacaagtaccaaagcagaattac[G/A]tatttcagaaatagaaatgggaca
ASB in cell types
breast tumor
ASB for transcription factors
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.24 2.89 0.880.02 1.88 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  obesity with early age of onset (age >2),  refractive error,  rheumatoid arthritis
GTEx eQTL Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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