rs34596632 chr22:17980488 A>C
- Sequence
catggaataccctcctagtgggca[A/C]ggacaactttcagctcctggaaaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- FOXK2_HUMAN ARI1B_HUMAN IKZF1_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.09 | -1.14 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | 2.16 | -1.91 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.69 | -1.39 | 1.00 | n/a | No Hit | |||
| HDAC1_HUMAN | 0.68 | 2.01 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood