rs34649579 chr17:57988807 T>A

Sequence
aagccctctgcgctctcgctatga[T/A]atgcatctcatggcgagatggcct
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.27 0.87 1.001.2·10-5 1.72
K562 (myelogenous leukemia) 2.77 -5.29 5.3·10-31.00 2.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Testis Whole_Blood

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