rs34681041 chr1:3453260 A>G
- Sequence
cgggacaccccagctccctccggc[A/G]ggccgggcctcgtcggtgcagtac
- ASB in cell types
- K562 (myelogenous leukemia) glioblastoma cells LoVo (colorectal adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- REST_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 2.02 | 0.11 | 1.00 | n/a | No Hit | |||
| RFOX2_HUMAN | -0.51 | 1.88 | 1.25 | n/a | n/a |
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