rs34689 chr5:34007604 A>C

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.61 0.95 0.701.1·10-3 1.06
GM19240 (B cells Lymphoblastoid Cell Lines) -1.44 1.78 1.000.01 1.00
LNCaP C4-2B (prostate carcinoma) -0.11 1.44 1.000.03 1.00
22RV1 (prostate carcinoma) 2.02 -0.30 0.051.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP birth weight comorbid depressive syndrome and alcohol dependence maternal transmission distortion paternal transmission distortion transmission distortion triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Cortex Brain_Frontal_Cortex_BA9 Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Thyroid Whole_Blood

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