rs34691340 chr21:36130399 G>T
- Sequence
gcctcctcctgggctgggcccgcg[G/T]tgtctcgtcccctcgcggagccgc
- ASB for transcription factors
- SP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | 2.47 | n/a | 2.50 | -2.58 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood