rs34716 chr19:29873620 C>G
- Sequence
gcggcgggtgggctcccctgaccc[C/G]gctccgacccggccccgcgccctc
- ASB in cell types
- thyroid gland MS-1 (Small cell lung carcinoma) iPS-derived dermal fibroblasts
- ASB for transcription factors
- RARA_HUMAN PTEN_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 1.38 | -0.19 | 1.36 | -2.70 | Concordant | |||
| PTEN_HUMAN | 1.78 | n/a | 2.00 | n/a | n/a |
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Motif analysis
