rs34716963 chr3:172169210 G>C
- Sequence
gtccaaaaggtgctttgaaccctt[G/C]gaggatgtggaatgccatgtcgac
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- CTCF_HUMAN RBM22_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.68 | 1.17 | n/a | No Hit | |||
| RBM22_HUMAN | 2.27 | -0.89 | 1.50 | n/a | n/a |
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