rs34839124 chr5:172904054 C>T
- Sequence
ccctggggcagccaacagcttgac[C/T]tggcagtcatccagcagccctgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- NFIB_HUMAN CREB1_HUMAN P66B_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIB_HUMAN | n/a | 1.25 | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | -1.50 | 1.93 | 2.00 | n/a | No Hit | |||
| P66B_HUMAN | -1.66 | 2.41 | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | -0.17 | 1.88 | 2.55 | n/a | No Hit | |||
| PRDM9_HUMAN | -1.64 | 1.94 | 1.00 | n/a | n/a |
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