rs34996 chr5:80976981 T>C

Sequence
tgagaaggggtccttagatgtaca[T/C]ggtctttctgttttggtccatagc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN A2NVP9_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.03 0.87 1.005.6·10-6 1.44 n/a No Hit
A2NVP9_HUMAN -2.78 1.55 1.000.03 1.50 n/a n/a
FOXA1_HUMAN -0.41 1.34 1.000.03 1.50 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP microalbuminuria
GTEx eQTL Adipose_Subcutaneous Muscle_Skeletal Nerve_Tibial Spleen

Download