ADASTRA v5.1.3
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rs34996
chr5:80976981
T
>
C
Sequence
tgagaaggggtccttagatgtaca[T/C]ggtctttctgttttggtccatagc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
A2NVP9_HUMAN
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.03
0.87
1.00
5.6·10
-6
1.44
n/a
No Hit
A2NVP9_HUMAN
-2.78
1.55
1.00
0.03
1.50
n/a
n/a
FOXA1_HUMAN
-0.41
1.34
1.00
0.03
1.50
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
microalbuminuria
GTEx eQTL
Adipose_Subcutaneous
,
Muscle_Skeletal
,
Nerve_Tibial
,
Spleen
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)