rs35333003 chr6:148637930 C>A

Sequence
agatcacaaggcaagctaccttca[C/A]gaaactagaaagacaaacaaaatc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 3.56 -3.35 2.7·10-61.00 1.00 n/a n/a
STAG1_HUMAN 1.76 -1.45 0.021.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP breast cancer

Download