rs35620030 chr10:1301363 G>T
- Sequence
actctggttaccaccaacagaggg[G/T]gatagcagcctttgatatggggat
- ASB in cell types
- bipolar neuron IPSC-derived bipolar neuron GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.39 | 0.57 | 1.54 | 1.13 | Weak Discordant |
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Motif analysis
