rs35638233 chr9:108272043 A>C
- Sequence
ttcaaaagacatttccacctccta[A/C]tctctgtgcctacaaaccaaatat
- ASB in cell types
- ESO-26 (Gastroesophageal junction adenocarcinoma)
- ASB for transcription factors
- GATA6_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA6_HUMAN | 2.41 | -2.01 | 1.00 | -4.54 | Concordant | |||
| FOXA2_HUMAN | 1.28 | -0.05 | 1.14 | n/a | No Hit |
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Motif analysis
