rs35685164 chr11:108648491 T>C
- Sequence
ttaaggcgcctcctagtgctgata[T/C]ggcttcagtgaccacaggcttaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM10847 (female B-cells Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) primary foreskin fibroblasts
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN STAT1_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.10 | 0.40 | 1.27 | n/a | No Hit | |||
| STAG1_HUMAN | 0.52 | 0.14 | 1.06 | n/a | n/a | |||
| STAT1_HUMAN | 1.71 | -1.03 | 1.50 | n/a | No Hit | |||
| SMC1A_HUMAN | 1.26 | 0.30 | 1.00 | n/a | n/a | |||
| ZN143_HUMAN | 1.99 | -0.35 | 1.33 | n/a | No Hit |
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