rs35832856 chr7:44200964 C>T
- Sequence
tatgagaaccctcaaccaggctga[C/T]cggatccggaagtggattgcgagc
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) brain prefrontal cortex region tissues CD14+ monocytes
- ASB for transcription factors
- TCF21_HUMAN OLIG2_HUMAN ELF1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 1.85 | n/a | 2.50 | n/a | n/a | |||
| OLIG2_HUMAN | 1.74 | -1.20 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 0.43 | 2.04 | 2.25 | n/a | No Hit | |||
| STAT1_HUMAN | 1.24 | -0.18 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Testis, Thyroid